Lfl_g33292


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g33292

Target Alias Description ECC score Gene Family Method Actions
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36522 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013978 CRR22 not classified & original description: CDS=1-2136 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.02 OrthoFinder output from all 47 species
Cba_g05763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75809 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28766 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31026 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51083 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06650.1 LOC_Os12g06650 Pentatricopeptide repeat-containing protein At4g15720... 0.02 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18931 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18987 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24183 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26306 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06666 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07802 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07807 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32911 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Msp_g24030 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46020 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07318 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15027 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16061 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017029 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo93321 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc02g011680.4.1 Solyc02g011680 Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08535 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16670 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 49 72
IPR002885 Pentatricopeptide_repeat 148 173
IPR002885 Pentatricopeptide_repeat 75 122
IPR046848 E_motif 191 253
No external refs found!