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  5. Cba_g26683

Cba_g26683


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26683
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Aev_g06719 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25951 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53035 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69749.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G053100.1 Ceric.26G053100 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g22999 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24778 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Gb_31300 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Lfl_g06235 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10291373g0010 PTL no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_331768g0020 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Msp_g35869 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08779 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16876 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g27740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g005380.2.1 Solyc11g005380 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Spa_g51431 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 220 306
IPR044822 Myb_DNA-bind_4 553 640
No external refs found!