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  5. Cba_g26917

Cba_g26917


Description : BBX class-III transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26917

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 CIA2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Aev_g05448 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24424 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09487 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13738 No alias CMF transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34213.t1 Aspi01Gene34213 BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09127 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04816 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23913 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os02g49880.1 LOC_Os02g49880 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Len_g31511 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
MA_470965g0010 No alias transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Pir_g15539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007602 No alias not classified & original description: CDS=193-1710 0.03 OrthoFinder output from all 47 species
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Tin_g06036 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 456 498
IPR000315 Znf_B-box 19 61
No external refs found!