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  5. Cba_g26963

Cba_g26963 (AL2)


Aliases : AL2

Description : methylation reader Alfin of PRC1 complex & original description: none


Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g26963

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00155940 AL5,... RNA biosynthesis.transcriptional activation.Alfin-like... 0.02 OrthoFinder output from all 47 species
Als_g04779 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Als_g05455 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Als_g06205 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Aop_g02041 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g04965 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g08659 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043317 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0244.g059922 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g33236 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g70690 AL1 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G100800.1 AL4, Ceric.03G100800 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G032800.1 AL2, Ceric.07G032800 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.26G041400.1 AL1, Ceric.26G041400 methylation reader Alfin of PRC1 complex & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.26 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre10.g441050 AL1 RNA biosynthesis.transcriptional activation.Alfin-like... 0.03 OrthoFinder output from all 47 species
Dac_g27389 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g30272 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21080 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Lfl_g25000 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g12414 AL6 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g11986 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Pir_g12876 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g49107 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g11100 No alias methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g19171 AL7 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g30132 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Tin_g00544 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g03128 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Tin_g03192 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g05421 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e027483_P002 AL1, Zm00001e027483 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035527_P001 AL5, Zm00001e035527 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 220 269
IPR021998 Alfin_N 9 134
No external refs found!