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  5. Cba_g27312

Cba_g27312 (ATMBD6, MBD6)


Aliases : ATMBD6, MBD6

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27312

Target Alias Description ECC score Gene Family Method Actions
Aob_g26098 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048602 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=313-1701 0.02 OrthoFinder output from all 47 species
Dac_g09713 MBD05, MBD5, ATMBD5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00835 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13428 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
MA_411073g0010 MBD05, MBD5, ATMBD5 methylation reader (MBD5-6) 0.02 OrthoFinder output from all 47 species
Msp_g37242 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04676 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 424 473
No external refs found!