1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g27786

Cba_g27786


Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27786
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AT5G64710 No alias Putative endonuclease or glycosyl hydrolase 0.02 OrthoFinder output from all 47 species
Als_g04902 EDA32 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20512.t1 Aspi01Gene20512 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G082600.1 EDA32, Ceric.02G082600 not classified & original description: pacid=50586080... 0.02 OrthoFinder output from all 47 species
Ceric.21G012500.1 Ceric.21G012500 not classified & original description: pacid=50604148... 0.01 OrthoFinder output from all 47 species
Ceric.34G047500.1 Ceric.34G047500 not classified & original description: pacid=50624040... 0.02 OrthoFinder output from all 47 species
GSVIVT01031320001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os07g44320.1 LOC_Os07g44320 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Pir_g05026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420681 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 10 147
IPR025605 OST-HTH/LOTUS_dom 709 768
IPR025605 OST-HTH/LOTUS_dom 829 891
No external refs found!