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  5. Cba_g27911

Cba_g27911 (AMS)


Aliases : AMS

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27911

Target Alias Description ECC score Gene Family Method Actions
Als_g11513 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26760 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08956 SCRM2, ICE2 transcriptional regulator *(DYT1/AMS) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene43193.t1 Aspi01Gene43193 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000319 No alias bHLH-type transcription factor & original description: CDS=1-1284 0.04 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g32381 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51705 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427394g0010 SCRM2, ICE2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_16489g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_89559g0010 AMS transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Msp_g06243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08918 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19168 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07432 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18806 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21966 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21967 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14150 ATBHLH029,... bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c13_14420V3.1 Pp3c13_14420 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010285 No alias bHLH-type transcription factor & original description: CDS=1-1623 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011393 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022593 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g16653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.02 OrthoFinder output from all 47 species
Spa_g06300 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08873 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28838 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 357 399
No external refs found!