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  5. Cba_g28034

Cba_g28034 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g28034
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Adi_g023730 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aev_g25753 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40141 UBQ10 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08097 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08770 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24990 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26970 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30978 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49628 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49928 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58520 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63264 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g71259 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23081.t1 UBQ11, Aspi01Gene23081 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57837.t1 UBQ10, Aspi01Gene57837 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34959 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.22G046000.1 UBQ7, RUB2,... not classified & original description: pacid=50614635... 0.02 OrthoFinder output from all 47 species
Cre07.g322100 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_35273 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
MA_100402g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
MA_10430977g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
MA_1213520g0010 UBQ11 Polyubiquitin 9 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_702665g0010 No alias Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g18242 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43028 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32858 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c22_21900V3.1 UBQ11, Pp3c22_21900 polyubiquitin 10 0.01 OrthoFinder output from all 47 species
Ppi_g55284 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21103 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30323 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009126_P001 UBQ11, Zm00001e009126 Polyubiquitin (Fragment) OS=Acetabularia peniculus... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 79 148
No external refs found!