Cba_g28760


Description : not classified & original description: none


Gene families : OG0001974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g28760

Target Alias Description ECC score Gene Family Method Actions
Ala_g15834 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g13073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0189.g056841 No alias not classified & original description: CDS=87-1391 0.03 OrthoFinder output from all 47 species
Ceric.27G011200.1 Ceric.27G011200 not classified & original description: pacid=50605217... 0.03 OrthoFinder output from all 47 species
Ceric.37G011600.1 Ceric.37G011600 not classified & original description: pacid=50616772... 0.03 OrthoFinder output from all 47 species
Dac_g16844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031729001 No alias Protein DJ-1 homolog C OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_36045 No alias Protein DJ-1 homolog B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g44330.5 LOC_Os05g44330 Protein DJ-1 homolog C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g108070.4.1 Solyc01g108070 Protein DJ-1 homolog C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g08683 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e003791_P002 Zm00001e003791 Protein DJ-1 homolog C OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002818 DJ-1/PfpI 265 426
IPR002818 DJ-1/PfpI 59 222
No external refs found!