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  5. Cba_g29050

Cba_g29050


Description : not classified & original description: none


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29050

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00039770 evm_27.TU.AmTr_v1... Probable xyloglucan galactosyltransferase GT19... 0.05 OrthoFinder output from all 47 species
AT2G29040 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
AT2G31990 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
Adi_g017997 GT18, ATGT18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13604 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Cba_g25028 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z125100.1 Ceric.1Z125100 not classified & original description: pacid=50582244... 0.03 OrthoFinder output from all 47 species
Dcu_g25023 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26388 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g05110.1 MUR3, KAM1,... UDP-galactose-dependent 1,2-beta-galactosyltransferase 0.05 OrthoFinder output from all 47 species
LOC_Os12g38450.1 LOC_Os12g38450 Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
Len_g09002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_73539g0010 GT18, ATGT18 Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_9990400g0010 RHS8 xyloglucan galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
Msp_g29118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015379 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: CDS=1-2448 0.02 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Spa_g04915 GT18, ATGT18 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g06906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 154 489
No external refs found!