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  5. Cba_g29865

Cba_g29865


Description : not classified & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29865

Target Alias Description ECC score Gene Family Method Actions
Aob_g20900 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012705 No alias not classified & original description: CDS=437-1615 0.03 OrthoFinder output from all 47 species
Ehy_g17300 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031769001 ATCXE12, CXE12 Probable carboxylesterase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031776001 No alias 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza echinata 0.02 OrthoFinder output from all 47 species
LOC_Os01g06210.1 LOC_Os01g06210 Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g13570.1 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10432405g0010 No alias Probable carboxylesterase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g10107 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098140.4.1 CXE20, AtCXE20,... Carboxylesterase 1 OS=Actinidia eriantha... 0.02 OrthoFinder output from all 47 species
Solyc01g108560.4.1 Solyc01g108560 Probable carboxylesterase 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g069800.1.1 Solyc02g069800 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g008870.2.1 GID1B, ATGID1B,... GID1-type gibberellin receptor 0.04 OrthoFinder output from all 47 species
Zm00001e034341_P001 ATCXE12, CXE12,... 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.02 OrthoFinder output from all 47 species
Zm00001e034366_P001 CXE13, ATCXE13,... Probable tuliposide A-converting enzyme b6, amyloplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e034372_P001 Zm00001e034372 Tuliposide A-converting enzyme 1, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 18 98
No external refs found!