Cba_g29976


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29976

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37820 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06397 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19086 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30196 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03671 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07015 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16765 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23950 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12658.t1 Aspi01Gene12658 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24003.t1 OTP84, Aspi01Gene24003 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35048.t1 Aspi01Gene35048 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35085.t1 Aspi01Gene35085 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0083.g038880 No alias not classified & original description: CDS=1-2250 0.07 OrthoFinder output from all 47 species
Cba_g31308 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.05 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.03 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.04 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Dac_g12138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06287 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06624 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34247 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g24196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g26265 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26217 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Sam_g08389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33277 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52133 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04965 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15629 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.04 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 112 135
IPR002885 Pentatricopeptide_repeat 83 105
IPR002885 Pentatricopeptide_repeat 6 53
No external refs found!