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  5. Cba_g30011

Cba_g30011


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g30011
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g038036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62756 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000167 No alias not classified & original description: CDS=1-1701 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008403 EMB2758 not classified & original description: CDS=1-1560 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011342 No alias not classified & original description: CDS=1-1953 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011901 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.01 OrthoFinder output from all 47 species
Azfi_s0069.g036571 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Azfi_s0118.g046610 OTP86 not classified & original description: CDS=1-2490 0.02 OrthoFinder output from all 47 species
Azfi_s0143.g051490 No alias not classified & original description: CDS=1-2688 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065835 No alias not classified & original description: CDS=1-1926 0.02 OrthoFinder output from all 47 species
Azfi_s0999.g094975 No alias not classified & original description: CDS=29-2698 0.02 OrthoFinder output from all 47 species
Cba_g03391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g58405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.02 OrthoFinder output from all 47 species
Ceric.02G054700.1 Ceric.02G054700 not classified & original description: pacid=50584211... 0.02 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.01 OrthoFinder output from all 47 species
Ceric.17G074800.1 Ceric.17G074800 not classified & original description: pacid=50618293... 0.01 OrthoFinder output from all 47 species
Ceric.38G052600.1 Ceric.38G052600 not classified & original description: pacid=50580600... 0.02 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50023 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25267 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g24510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.01 OrthoFinder output from all 47 species
Len_g19013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g34226 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34313 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008817 CRR22 not classified & original description: CDS=1-2019 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012842 CRR2 not classified & original description: CDS=114-1901 0.03 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04696 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 188 211
IPR002885 Pentatricopeptide_repeat 491 514
IPR002885 Pentatricopeptide_repeat 620 646
IPR002885 Pentatricopeptide_repeat 15 62
IPR002885 Pentatricopeptide_repeat 214 260
IPR002885 Pentatricopeptide_repeat 315 361
IPR002885 Pentatricopeptide_repeat 718 766
IPR002885 Pentatricopeptide_repeat 112 159
IPR002885 Pentatricopeptide_repeat 516 562
IPR002885 Pentatricopeptide_repeat 416 462
IPR046848 E_motif 836 898
No external refs found!