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  5. Cba_g33255

Cba_g33255 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g33255

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene37289.t1 APUM12, PUM12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g544700 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_41365 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g20896 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04737 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 788 805
IPR001313 Pumilio_RNA-bd_rpt 715 745
IPR001313 Pumilio_RNA-bd_rpt 639 669
IPR001313 Pumilio_RNA-bd_rpt 603 637
IPR001313 Pumilio_RNA-bd_rpt 750 783
IPR001313 Pumilio_RNA-bd_rpt 677 708
IPR001313 Pumilio_RNA-bd_rpt 822 856
No external refs found!