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  5. Cba_g33527

Cba_g33527 (AT-NHX1, ATNHX1, ATNHX, NHX1)


Aliases : AT-NHX1, ATNHX1, ATNHX, NHX1

Description : proton:sodium cation antiporter *(NHX) & original description: none


Gene families : OG0000899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g33527

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00134170 AT-NHX1, ATNHX1,... Solute transport.carrier-mediated transport.CPA... 0.02 OrthoFinder output from all 47 species
Adi_g018953 AT-NHX1, ATNHX1,... proton:sodium cation antiporter *(NHX) & original... 0.04 OrthoFinder output from all 47 species
Als_g61567 AT-NHX1, ATNHX1,... proton:sodium cation antiporter *(NHX) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01037753001 NHX3, ATNHX3 Solute transport.carrier-mediated transport.CPA... 0.03 OrthoFinder output from all 47 species
Nbi_g13134 AT-NHX1, ATNHX1,... proton:sodium cation antiporter *(NHX) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g32893 NHX2, ATNHX2 proton:sodium cation antiporter *(NHX) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g098190.3.1 NHX2, ATNHX2,... proton:sodium cation antiporter (NHX) 0.03 OrthoFinder output from all 47 species
Tin_g08381 NHX3, ATNHX3 proton:sodium cation antiporter *(NHX) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 28 440
No external refs found!