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  5. Lfl_g34066

Lfl_g34066


Description : not classified & original description: none


Gene families : OG0003840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34066
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aev_g02527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02268 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g14147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012719 No alias not classified & original description: CDS=210-2990 0.04 OrthoFinder output from all 47 species
Ceric.23G074800.1 Ceric.23G074800 not classified & original description: pacid=50611476... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.85 No alias Protein transport protein Sec24-like At3g07100... 0.02 OrthoFinder output from all 47 species
Dcu_g23056 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g04904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036116001 No alias Protein transport protein Sec24-like At3g07100... 0.03 OrthoFinder output from all 47 species
Gb_21909 No alias Protein transport protein Sec24-like At3g07100... 0.04 OrthoFinder output from all 47 species
LOC_Os04g33690.1 LOC_Os04g33690 Protein transport protein Sec24-like At3g07100... 0.04 OrthoFinder output from all 47 species
Msp_g04931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002395 No alias thiol-disulfide oxidoreductase *(ERO) & original... 0.03 OrthoFinder output from all 47 species
Sam_g25334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440407 No alias Protein transport protein Sec24-like At3g07100... 0.08 OrthoFinder output from all 47 species
Solyc11g068500.2.1 Solyc11g068500 Protein transport protein Sec24-like At3g07100... 0.05 OrthoFinder output from all 47 species
Spa_g09466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 123 375
IPR006900 Sec23/24_helical_dom 500 611
IPR006895 Znf_Sec23_Sec24 52 85
No external refs found!