Description : component *(uS13c) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0004147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G14320 | No alias | Ribosomal protein S13/S18 family | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035921 | No alias | component *(uS13c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08263 | No alias | component *(uS13c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g493950 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008933001 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431241g0010 | No alias | component mtRPS13|psRPS13 of small ribosomal subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Smo140847 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005396_P004 | Zm00001e005396 | component mtRPS13|psRPS13 of small ribosomal subunit... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001892 | Ribosomal_S13 | 1 | 105 |
| No external refs found! |
