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  5. Cba_g34914

Cba_g34914


Description : not classified & original description: none


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g34914

Target Alias Description ECC score Gene Family Method Actions
Adi_g100972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47750 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g33736 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Als_g62379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17691 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aop_g03955 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G029300.1 Ceric.02G029300 not classified & original description: pacid=50584188... 0.05 OrthoFinder output from all 47 species
Ceric.04G080100.1 Ceric.04G080100 not classified & original description: pacid=50631023... 0.03 OrthoFinder output from all 47 species
Cre06.g292650 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g11979 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Mp4g16160.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g16230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15696 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ore_g25799 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 8 57
No external refs found!