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  5. Cba_g35053

Cba_g35053


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g35053
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT1G11360 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g012300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g57128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g649650 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009157001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_20771 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_32428 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52314.1 LOC_Os02g52314 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g36600.1 LOC_Os07g36600 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Lfl_g02780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24168 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_32640g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17330.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g32113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo267677 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc05g054270.2.1 Solyc05g054270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g011660.3.1 Solyc09g011660 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc10g086670.2.1 Solyc10g086670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g099520.3.1 Solyc12g099520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 61 199
No external refs found!