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  5. Cba_g36590

Cba_g36590 (SPL7, ATSPL7)


Aliases : SPL7, ATSPL7

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g36590

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Adi_g013176 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015714 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077071 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33190 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27771.t1 SPL2, Aspi01Gene27771 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67362.t1 Aspi01Gene67362 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043231 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0213.g058306 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G073300.1 SPL8, Ceric.11G073300 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.39G052200.1 SPL8, Ceric.39G052200 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g03001 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010496001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01032239001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Pir_g47425 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48099 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.03 OrthoFinder output from all 47 species
Sam_g05145 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30412 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13544 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 196 269
No external refs found!