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  5. Cba_g37733

Cba_g37733


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g37733
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Adi_g107117 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aev_g32777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63558.t1 Aspi01Gene63558 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G002100.1 Ceric.14G002100 not classified & original description: pacid=50633322... 0.03 OrthoFinder output from all 47 species
Ceric.23G058400.1 Ceric.23G058400 not classified & original description: pacid=50610018... 0.1 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Dcu_g09357 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dcu_g09533 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g08256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38252 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g06770.1 LOC_Os09g06770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g34590.1 LOC_Os10g34590 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.01 OrthoFinder output from all 47 species
Len_g00607 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
MA_413614g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20916 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g23756 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Pnu_g06037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11589 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g14669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09700 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e024003_P001 Zm00001e024003 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Zm00001e036731_P001 Zm00001e036731 E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 33 64
IPR001841 Znf_RING 286 328
No external refs found!