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  5. Lfl_g34606

Lfl_g34606


Description : nucleocytoplasmic import karyopherin *(IMB1) & original description: none


Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34606

Target Alias Description ECC score Gene Family Method Actions
AT5G53480 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from all 47 species
Ala_g09011 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.1 OrthoFinder output from all 47 species
Aop_g19661 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g13735 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01038575001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Gb_04236 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Gb_35028 No alias IMB1 nucleocytoplasmic import karyopherin 0.04 OrthoFinder output from all 47 species
Len_g14772 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.04 OrthoFinder output from all 47 species
MA_12771g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.04 OrthoFinder output from all 47 species
MA_871185g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Mp6g11310.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Msp_g06031 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g18337 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g30274 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g40488 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g08379 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g15801 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Smo124593 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Solyc03g082940.3.1 Solyc03g082940 IMB1 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Tin_g06671 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0031267 small GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 24 103
No external refs found!