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  5. Cba_g40627

Cba_g40627


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g40627

Target Alias Description ECC score Gene Family Method Actions
AT2G42140 No alias VQ motif-containing protein 0.05 OrthoFinder output from all 47 species
Aev_g12958 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g00434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37551.t1 Aspi01Gene37551 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46261.t1 Aspi01Gene46261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66306.t1 Aspi01Gene66306 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G088100.1 Ceric.09G088100 not classified & original description: pacid=50586807... 0.05 OrthoFinder output from all 47 species
Ceric.12G096300.1 Ceric.12G096300 not classified & original description: pacid=50601354... 0.03 OrthoFinder output from all 47 species
Ceric.19G048400.1 Ceric.19G048400 not classified & original description: pacid=50575656... 0.08 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.03 OrthoFinder output from all 47 species
Ceric.26G063300.1 Ceric.26G063300 not classified & original description: pacid=50599964... 0.05 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_122594g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2888g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g03890.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g01741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g39696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24720 No alias WRKY33-activaTing protein *(SIB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 43 67
No external refs found!