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  5. Cba_g43194

Cba_g43194


Description : not classified & original description: none


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g43194
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00121850 RHS8,... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.02 OrthoFinder output from all 47 species
AT1G63450 RHS8 root hair specific 8 0.03 OrthoFinder output from all 47 species
AT2G32740 ATGT13, GT13 galactosyltransferase 13 0.02 OrthoFinder output from all 47 species
Adi_g079275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079878 GT18, ATGT18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0127.g048682 No alias not classified & original description: CDS=644-2323 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060223 No alias not classified & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Cba_g25028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07922 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13033 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g34183 No alias galacturonosyltransferase *(XUT1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26388 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g08741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_5948g0010 No alias Probable xyloglucan galactosyltransferase GT11... 0.03 OrthoFinder output from all 47 species
Msp_g41625 GT18, ATGT18 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36894 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018133 No alias not classified & original description: CDS=1-1707 0.06 OrthoFinder output from all 47 species
Solyc07g044960.1.1 GT18, ATGT18,... Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g079040.1.1 Solyc08g079040 Probable xyloglucan galactosyltransferase GT19... 0.03 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Tin_g13029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000360_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
Zm00001e004645_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
Zm00001e004647_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 121 461
No external refs found!