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  5. Cba_g43648

Cba_g43648 (RUB1, ATRUB1, NEDD8)


Aliases : RUB1, ATRUB1, NEDD8

Description : RUB ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g43648
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AT1G11980 RUB3 ubiquitin-related protein 3 0.02 OrthoFinder output from all 47 species
AT1G31340 RUB1, ATRUB1, NEDD8 related to ubiquitin 1 0.03 OrthoFinder output from all 47 species
AT4G05320 UBQ10 polyubiquitin 10 0.03 OrthoFinder output from all 47 species
AT5G03240 UBQ3 polyubiquitin 3 0.03 OrthoFinder output from all 47 species
Adi_g129218 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ala_g22856 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ala_g31252 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g38104 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55811 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58521 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58845 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15004 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.24G048500.1 UBQ11, Ceric.24G048500 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g41473 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36572 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27408 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28234 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_10435699g0010 No alias component RPS27a of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g02683 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34037 UBQ12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c13_20060V3.1 Pp3c13_20060 ubiquitin 8 0.02 OrthoFinder output from all 47 species
Ppi_g05460 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g19042 No alias UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12172 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 113 184
IPR000626 Ubiquitin-like_dom 37 108
No external refs found!