Cba_g45029


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45029

Target Alias Description ECC score Gene Family Method Actions
Adi_g025491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.05 OrthoFinder output from all 47 species
Ceric.05G087100.1 Ceric.05G087100 not classified & original description: pacid=50579181... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016874001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49740.1 EMB2744, LOC_Os05g49740 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39910.1 LOC_Os07g39910 Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
Len_g03325 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04331 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g17736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015486 No alias not classified & original description: CDS=1-1653 0.02 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 152 174
IPR002885 Pentatricopeptide_repeat 50 75
No external refs found!