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  5. Cba_g45065

Cba_g45065


Description : AHL clade-A transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45065
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT1G20900 AHL27, ORE7, ESC Predicted AT-hook DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT2G35270 GIK Predicted AT-hook DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT2G45430 AHL22 AT-hook motif nuclear-localized protein 22 0.02 OrthoFinder output from all 47 species
AT4G17800 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G35390 AGF1 AT-hook protein of GA feedback 1 0.03 OrthoFinder output from all 47 species
Adi_g055781 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058662 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13410.t1 AHL22, Aspi01Gene13410 AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene44753.t1 Aspi01Gene44753 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G019000.1 Ceric.38G019000 AHL clade-A transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g42758 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_130452g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
MA_90407g0010 AHL22 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Msp_g29316 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28223 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28224 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g077010.1.1 Solyc08g077010 AT-hook motif nuclear-localized protein 23... 0.05 OrthoFinder output from all 47 species
Zm00001e001193_P001 AHL20, Zm00001e001193 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Zm00001e024863_P001 AHL22, Zm00001e024863 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e037561_P001 AHL27, ORE7,... AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 107 219
No external refs found!