Cba_g45295


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00075010 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00254390 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Als_g58761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08491.t1 Aspi01Gene08491 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49158.t1 Aspi01Gene49158 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61845.t1 Aspi01Gene61845 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G018800.1 Ceric.06G018800 not classified & original description: pacid=50620702... 0.03 OrthoFinder output from all 47 species
Ceric.06G018900.1 Ceric.06G018900 not classified & original description: pacid=50620412... 0.03 OrthoFinder output from all 47 species
Ceric.08G043000.1 Ceric.08G043000 not classified & original description: pacid=50637921... 0.03 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_27805 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_37280 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g33430.1 LOC_Os11g33430 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33942.1 LOC_Os11g33942 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436908g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_601610g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g28190.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g49318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004358 glutamate N-acetyltransferase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!