Cba_g45673


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45673

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g013193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079818 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30199 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01012.t1 REME1, Aspi01Gene01012 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71933.t1 Aspi01Gene71933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71934.t1 Aspi01Gene71934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037385 OTP84 not classified & original description: CDS=80-2584 0.03 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.03 OrthoFinder output from all 47 species
Azfi_s0896.g091565 No alias not classified & original description: CDS=1-2586 0.04 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G062400.1 Ceric.13G062400 not classified & original description: pacid=50636814... 0.03 OrthoFinder output from all 47 species
Ceric.19G069600.1 Ceric.19G069600 not classified & original description: pacid=50575437... 0.03 OrthoFinder output from all 47 species
Ceric.20G001900.1 Ceric.20G001900 not classified & original description: pacid=50565969... 0.03 OrthoFinder output from all 47 species
Ceric.36G033700.1 Ceric.36G033700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05938 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016874001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01024588001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Gb_12832 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g03238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06282 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41973 OSB4 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Pir_g48319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61681 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63504 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43481 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43670 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57817 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001330 No alias not classified & original description: CDS=1-3081 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010017 No alias not classified & original description: CDS=111-3410 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010984 No alias not classified & original description: CDS=1-2295 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017928 No alias not classified & original description: CDS=112-2919 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019259 No alias not classified & original description: CDS=1-1518 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019309 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023530 CRR22 not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05656 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26898 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 58 104
IPR002885 Pentatricopeptide_repeat 135 156
No external refs found!