Aliases : MEF22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g45687 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00250660 | OTP84,... | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00110050 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00172690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g37170... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00083p00015670 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G65570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005787 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036862 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g065393 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069206 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102645 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g109057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g17854 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22716 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27846 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene41775.t2 | Aspi01Gene41775 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46912.t1 | Aspi01Gene46912 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene72589.t1 | MEF22, Aspi01Gene72589 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001409 | No alias | not classified & original description: CDS=1-2469 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0268.g061096 | No alias | not classified & original description: CDS=119-2467 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G047700.1 | Ceric.02G047700 | not classified & original description: pacid=50586056... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G080200.1 | Ceric.11G080200 | not classified & original description: pacid=50595969... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G030100.1 | Ceric.12G030100 | not classified & original description: pacid=50600629... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G066400.1 | Ceric.15G066400 | not classified & original description: pacid=50640755... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G070400.1 | Ceric.25G070400 | not classified & original description: pacid=50594567... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G058000.1 | Ceric.32G058000 | not classified & original description: pacid=50598467... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07956 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21670 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g35725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21131 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23295 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000034001 | MEF19 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025574001 | No alias | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g51350.1 | LOC_Os04g51350 | RNA editing factor (AEF1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g13990.1 | LOC_Os08g13990 | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04809 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g25473 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g43648 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02262 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04187 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g22099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g38215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_179801g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g04990.1 | PTAC9, OSB2 | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03562 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g03763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g33676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38610 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36408 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g31112 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004036 | OTP84 | not classified & original description: CDS=1-1773 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004484 | No alias | not classified & original description: CDS=1-2304 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007167 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-3162 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007537 | No alias | not classified & original description: CDS=117-2237 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008323 | No alias | not classified & original description: CDS=476-3628 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010017 | No alias | not classified & original description: CDS=111-3410 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017091 | No alias | not classified & original description: CDS=1-3111 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017928 | No alias | not classified & original description: CDS=112-2919 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0093.g019001 | No alias | not classified & original description: CDS=1-2865 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019309 | No alias | not classified & original description: CDS=1-1605 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022672 | No alias | not classified & original description: CDS=1-3558 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0144.g022971 | No alias | not classified & original description: CDS=343-1173 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0199.g025568 | No alias | not classified & original description: CDS=1-2793 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g21956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38417 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo16626 | No alias | Pentatricopeptide repeat-containing protein At4g16835,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo34484 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007040.1.1 | Solyc09g007040 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23272 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g25192 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g31905 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | HCCA |
| CC | GO:0000178 | exosome (RNase complex) | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
| No external refs found! |
