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  5. Cba_g45751

Cba_g45751 (TIR5, MSG1, NPH4,...)


Aliases : TIR5, MSG1, NPH4, IAA23, IAA25, IAA21, BIP, ARF7

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45751

Target Alias Description ECC score Gene Family Method Actions
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.02 OrthoFinder output from all 47 species
Gb_32404 ARF4 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
MA_103763g0010 ARF6 Auxin response factor 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g15165 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022728_P002 ARF1, Zm00001e022728 transcription factor (ARF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 112 198
No external refs found!