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  5. Lfl_g35357

Lfl_g35357 (RR12, ARR12)


Aliases : RR12, ARR12

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g35357
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00186590 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
Aob_g14548 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10873 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28823.t1 RR14, ARR14,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009393 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035584 RR12, ARR12 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g26069 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ceric.21G058200.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre13.g572450 APRR2, PRR2 No description available 0.01 OrthoFinder output from all 47 species
Dac_g02359 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20630 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06158 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51591 ARR10, RR10 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e018927_P001 ARR11, Zm00001e018927 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 200 250
IPR001789 Sig_transdc_resp-reg_receiver 33 141
No external refs found!