<phyloxml>
  <phylogeny rooted="True">
    <clade>
      <branch_length>0.1</branch_length>
      <events>
        <speciations>1</speciations>
      </events>
      <clade>
        <branch_length>0.0327022</branch_length>
        <events>
          <speciations>1</speciations>
        </events>
        <clade>
          <branch_length>0.0234099</branch_length>
          <events>
            <speciations>1</speciations>
          </events>
          <clade>
            <branch_length>0.264742</branch_length>
            <name>Ppi_g39612</name>
            <id>1974261</id>
            <taxonomy>
              <code>Ppi</code>
            </taxonomy>
          </clade>
          <clade>
            <branch_length>0.166798</branch_length>
            <events>
              <speciations>1</speciations>
            </events>
            <clade>
              <branch_length>0.172981</branch_length>
              <events>
                <speciations>1</speciations>
              </events>
              <clade>
                <branch_length>0.0172021</branch_length>
                <name>CepurGG1.7G169600.2.p</name>
              </clade>
              <clade>
                <branch_length>0.112335</branch_length>
                <name>CepurGG1.7G169600.1.p</name>
              </clade>
            </clade>
            <clade>
              <branch_length>0.304317</branch_length>
              <name>CepurGG1.10G125500.1.p</name>
            </clade>
          </clade>
        </clade>
        <clade>
          <branch_length>0.0200845</branch_length>
          <events>
            <speciations>1</speciations>
          </events>
          <clade>
            <branch_length>0.523998</branch_length>
            <name>Pp3c6_2530V3.1</name>
            <id>1556494</id>
            <taxonomy>
              <code>Ppa</code>
            </taxonomy>
          </clade>
          <clade>
            <branch_length>0.249599</branch_length>
            <name>CepurGG1.10G145400.1.p</name>
          </clade>
        </clade>
      </clade>
      <clade>
        <branch_length>0.0327022</branch_length>
        <events>
          <speciations>1</speciations>
        </events>
        <clade>
          <branch_length>0.128073</branch_length>
          <events>
            <speciations>1</speciations>
          </events>
          <clade>
            <branch_length>0.177295</branch_length>
            <events>
              <speciations>1</speciations>
            </events>
            <clade>
              <branch_length>0.484355</branch_length>
              <name>Pp3c9_12890V3.1</name>
              <id>1559738</id>
              <taxonomy>
                <code>Ppa</code>
              </taxonomy>
            </clade>
            <clade>
              <branch_length>0.0517228</branch_length>
              <events>
                <speciations>1</speciations>
              </events>
              <clade>
                <branch_length>0.0301734</branch_length>
                <events>
                  <speciations>1</speciations>
                </events>
                <clade>
                  <branch_length>0.145683</branch_length>
                  <events>
                    <speciations>1</speciations>
                  </events>
                  <clade>
                    <branch_length>0.0382504</branch_length>
                    <name>Adi_g078443</name>
                    <id>2509894</id>
                    <taxonomy>
                      <code>Adi</code>
                    </taxonomy>
                  </clade>
                  <clade>
                    <branch_length>0.0362137</branch_length>
                    <name>Adi_g037228</name>
                    <id>2468679</id>
                    <taxonomy>
                      <code>Adi</code>
                    </taxonomy>
                  </clade>
                </clade>
                <clade>
                  <branch_length>0.240281</branch_length>
                  <name>CepurGG1.7G122700.1.p</name>
                </clade>
              </clade>
              <clade>
                <branch_length>0.265999</branch_length>
                <name>Ppi_g34649</name>
                <id>1969298</id>
                <taxonomy>
                  <code>Ppi</code>
                </taxonomy>
              </clade>
            </clade>
          </clade>
          <clade>
            <branch_length>0.0880426</branch_length>
            <events>
              <speciations>1</speciations>
            </events>
            <clade>
              <branch_length>0.182944</branch_length>
              <events>
                <speciations>1</speciations>
              </events>
              <clade>
                <branch_length>0.540964</branch_length>
                <events>
                  <speciations>1</speciations>
                </events>
                <clade>
                  <branch_length>0.0</branch_length>
                  <name>Adi_g069966</name>
                  <id>2501417</id>
                  <taxonomy>
                    <code>Adi</code>
                  </taxonomy>
                </clade>
                <clade>
                  <branch_length>0.0</branch_length>
                  <name>Cba_g48281</name>
                  <id>999692</id>
                  <taxonomy>
                    <code>Cba</code>
                  </taxonomy>
                </clade>
              </clade>
              <clade>
                <branch_length>0.598741</branch_length>
                <name>Cba_g55253</name>
                <id>1006664</id>
                <taxonomy>
                  <code>Cba</code>
                </taxonomy>
              </clade>
            </clade>
            <clade>
              <branch_length>0.676931</branch_length>
              <name>Adi_g068679</name>
              <id>2500130</id>
              <taxonomy>
                <code>Adi</code>
              </taxonomy>
            </clade>
          </clade>
        </clade>
        <clade>
          <branch_length>0.0583745</branch_length>
          <events>
            <speciations>1</speciations>
          </events>
          <clade>
            <branch_length>0.322233</branch_length>
            <events>
              <speciations>1</speciations>
            </events>
            <clade>
              <branch_length>0.0592404</branch_length>
              <name>Adi_g067050</name>
              <id>2498501</id>
              <taxonomy>
                <code>Adi</code>
              </taxonomy>
            </clade>
            <clade>
              <branch_length>0.20177</branch_length>
              <name>Adi_g072021</name>
              <id>2503472</id>
              <taxonomy>
                <code>Adi</code>
              </taxonomy>
            </clade>
          </clade>
          <clade>
            <branch_length>0.346721</branch_length>
            <events>
              <speciations>1</speciations>
            </events>
            <clade>
              <branch_length>0.171935</branch_length>
              <name>Adi_g066578</name>
              <id>2498029</id>
              <taxonomy>
                <code>Adi</code>
              </taxonomy>
            </clade>
            <clade>
              <branch_length>0.181368</branch_length>
              <name>Adi_g029724</name>
              <id>2461175</id>
              <taxonomy>
                <code>Adi</code>
              </taxonomy>
            </clade>
          </clade>
        </clade>
      </clade>
    </clade>
  </phylogeny>
  <graphs>
    <graph type="heatmap">
      <name>Heatmap</name>
      <legend show="1">
        <field>
          <name>Spore</name>
        </field>
        <field>
          <name>Rhizome</name>
        </field>
        <field>
          <name>Root</name>
        </field>
        <field>
          <name>Flower</name>
        </field>
        <field>
          <name>Leaf</name>
        </field>
        <field>
          <name>Stem</name>
        </field>
        <field>
          <name>Female</name>
        </field>
        <field>
          <name>Seeds</name>
        </field>
        <field>
          <name>Male</name>
        </field>
        <gradient>
          <name>YlGnBu</name>
          <classes>9</classes>
        </gradient>
      </legend>
      <data>
        <values for="999692">
          <value></value>
          <value></value>
          <value>1.0</value>
          <value></value>
          <value>0.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="1006664">
          <value></value>
          <value></value>
          <value>1.0</value>
          <value></value>
          <value>0.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="1556494">
          <value>0.38112274134598384</value>
          <value></value>
          <value></value>
          <value></value>
          <value>0.859526212995499</value>
          <value></value>
          <value></value>
          <value></value>
          <value>1.0</value>
        </values>
        <values for="1559738">
          <value>0.16868160585372227</value>
          <value></value>
          <value></value>
          <value></value>
          <value>0.2799132183148573</value>
          <value></value>
          <value></value>
          <value></value>
          <value>1.0</value>
        </values>
        <values for="1969298">
          <value></value>
          <value>0.3482376481270753</value>
          <value>1.0</value>
          <value></value>
          <value>0.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="1974261">
          <value></value>
          <value>0.029240837467817787</value>
          <value>1.0</value>
          <value></value>
          <value>0.005413554914452815</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2461175">
          <value></value>
          <value>0.0</value>
          <value>0.2217537770518579</value>
          <value></value>
          <value>1.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2468679">
          <value></value>
          <value>0.08110051160062566</value>
          <value>1.0</value>
          <value></value>
          <value>0.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2498029">
          <value></value>
          <value>0.044423562918814954</value>
          <value>1.0</value>
          <value></value>
          <value>0.00482624391091827</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2498501">
          <value></value>
          <value>0.0</value>
          <value>1.0</value>
          <value></value>
          <value>0.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2500130">
          <value></value>
          <value>0.05599833986407122</value>
          <value>1.0</value>
          <value></value>
          <value>0.0</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2501417">
          <value></value>
          <value>0.0</value>
          <value>1.0</value>
          <value></value>
          <value>0.45403763420022486</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2503472">
          <value></value>
          <value>0.0052367287587120935</value>
          <value>1.0</value>
          <value></value>
          <value>0.002749856446094543</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
        <values for="2509894">
          <value></value>
          <value>0.0</value>
          <value>1.0</value>
          <value></value>
          <value>0.11647717544294633</value>
          <value></value>
          <value></value>
          <value></value>
          <value></value>
        </values>
      </data>
    </graph>
    <graph type="binary">
      <name>Low Expression</name>
      <legend show="1">
        <field>
          <name>Low expression</name>
          <color>0xf03b20</color>
          <shape>circle</shape>
        </field>
      </legend>
      <data>
        <values for="999692">
          <value>1</value>
        </values>
        <values for="1006664">
          <value>1</value>
        </values>
        <values for="1556494">
          <value>0</value>
        </values>
        <values for="1559738">
          <value>0</value>
        </values>
        <values for="1969298">
          <value>1</value>
        </values>
        <values for="1974261">
          <value>1</value>
        </values>
        <values for="2461175">
          <value>1</value>
        </values>
        <values for="2468679">
          <value>1</value>
        </values>
        <values for="2498029">
          <value>1</value>
        </values>
        <values for="2498501">
          <value>1</value>
        </values>
        <values for="2500130">
          <value>1</value>
        </values>
        <values for="2501417">
          <value>1</value>
        </values>
        <values for="2503472">
          <value>1</value>
        </values>
        <values for="2509894">
          <value>1</value>
        </values>
      </data>
    </graph>
    <graph type="multibar">
      <name>Expression Range</name>
      <legend show="1">
        <field>
          <name>Max. Expression (TPM)</name>
          <color>0x664977</color>
        </field>
      </legend>
      <data>
        <values for="999692">
          <value>2.4287186666666667</value>
        </values>
        <values for="1006664">
          <value>7.636133333333333</value>
        </values>
        <values for="1556494">
          <value>93.53653333333334</value>
        </values>
        <values for="1559738">
          <value>1224.52</value>
        </values>
        <values for="1969298">
          <value>7.038804333333334</value>
        </values>
        <values for="1974261">
          <value>9.126289</value>
        </values>
        <values for="2461175">
          <value>4.244933333333333</value>
        </values>
        <values for="2468679">
          <value>4.91008</value>
        </values>
        <values for="2498029">
          <value>8.9757171</value>
        </values>
        <values for="2498501">
          <value>2.8794266666666664</value>
        </values>
        <values for="2500130">
          <value>5.824422666666667</value>
        </values>
        <values for="2501417">
          <value>3.4401333333333333</value>
        </values>
        <values for="2503472">
          <value>9.061636666666667</value>
        </values>
        <values for="2509894">
          <value>3.806010333333333</value>
        </values>
      </data>
    </graph>
  </graphs>
  <taxonomies>
    <taxonomy code="Adi">
      <color>0x98fb98</color>
      <name>Actinostachys digitata</name>
      <url>http://conekt.ku.dk/species/view/55</url>
    </taxonomy>
    <taxonomy code="Cba">
      <color>0xff7f50</color>
      <name>Cibotium barometz</name>
      <url>http://conekt.ku.dk/species/view/20</url>
    </taxonomy>
    <taxonomy code="Ppa">
      <color>0xb22222</color>
      <name>Physcomitrella patens</name>
      <url>http://conekt.ku.dk/species/view/32</url>
    </taxonomy>
    <taxonomy code="Ppi">
      <color>0x87cefa</color>
      <name>Pyrrosia piloselloides</name>
      <url>http://conekt.ku.dk/species/view/44</url>
    </taxonomy>
  </taxonomies>
</phyloxml>