Coexpression cluster: Cluster_181 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009889 regulation of biosynthetic process 5.05% (10/198) 2.28 4.8e-05 0.000933
GO:0031326 regulation of cellular biosynthetic process 5.05% (10/198) 2.28 4.8e-05 0.000933
GO:0010556 regulation of macromolecule biosynthetic process 5.05% (10/198) 2.28 4.8e-05 0.000933
GO:0019222 regulation of metabolic process 5.56% (11/198) 2.32 1.6e-05 0.000976
GO:0050794 regulation of cellular process 6.06% (12/198) 2.16 1.9e-05 0.000984
GO:0010468 regulation of gene expression 5.05% (10/198) 2.26 5.6e-05 0.001016
GO:0120009 intermembrane lipid transfer 1.01% (2/198) 7.24 6.5e-05 0.001048
GO:0120013 lipid transfer activity 1.01% (2/198) 7.24 6.5e-05 0.001048
GO:0065007 biological regulation 6.06% (12/198) 2.1 2.8e-05 0.001086
GO:0051252 regulation of RNA metabolic process 5.05% (10/198) 2.3 4.2e-05 0.001088
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.05% (10/198) 2.29 4.6e-05 0.001089
GO:0050789 regulation of biological process 6.06% (12/198) 2.12 2.6e-05 0.001145
GO:1903506 regulation of nucleic acid-templated transcription 5.05% (10/198) 2.31 4.1e-05 0.001155
GO:0006355 regulation of DNA-templated transcription 5.05% (10/198) 2.31 4.1e-05 0.001155
GO:2001141 regulation of RNA biosynthetic process 5.05% (10/198) 2.31 4.1e-05 0.001155
GO:0060255 regulation of macromolecule metabolic process 5.56% (11/198) 2.32 1.5e-05 0.001187
GO:0031323 regulation of cellular metabolic process 5.56% (11/198) 2.34 1.4e-05 0.001416
GO:0080090 regulation of primary metabolic process 5.56% (11/198) 2.34 1.4e-05 0.002095
GO:0051171 regulation of nitrogen compound metabolic process 5.56% (11/198) 2.34 1.4e-05 0.002095
GO:0061024 membrane organization 1.01% (2/198) 6.44 0.000225 0.003463
GO:0005319 lipid transporter activity 1.01% (2/198) 6.24 0.000299 0.004387
GO:0008150 biological_process 18.18% (36/198) 0.83 0.000485 0.006788
GO:1990904 ribonucleoprotein complex 1.52% (3/198) 4.24 0.000548 0.007337
GO:0006869 lipid transport 1.01% (2/198) 5.78 0.000584 0.007492
GO:0004089 carbonate dehydratase activity 1.01% (2/198) 5.66 0.000699 0.008612
GO:0005488 binding 18.69% (37/198) 0.77 0.000821 0.009726
GO:0003700 DNA-binding transcription factor activity 3.03% (6/198) 2.35 0.001282 0.01463
GO:0003674 molecular_function 27.78% (55/198) 0.55 0.001516 0.016681
GO:0140110 transcription regulator activity 3.03% (6/198) 2.26 0.001733 0.018404
GO:0003677 DNA binding 4.04% (8/198) 1.76 0.002723 0.027952
GO:0004842 ubiquitin-protein transferase activity 1.52% (3/198) 3.4 0.002958 0.029386
GO:0019787 ubiquitin-like protein transferase activity 1.52% (3/198) 3.29 0.003688 0.035493
GO:0009617 response to bacterium 0.51% (1/198) 7.24 0.006586 0.040568
GO:0032515 negative regulation of phosphoprotein phosphatase activity 0.51% (1/198) 7.24 0.006586 0.040568
GO:0010563 negative regulation of phosphorus metabolic process 0.51% (1/198) 7.24 0.006586 0.040568
GO:0045936 negative regulation of phosphate metabolic process 0.51% (1/198) 7.24 0.006586 0.040568
GO:0031400 negative regulation of protein modification process 0.51% (1/198) 7.24 0.006586 0.040568
GO:0010923 negative regulation of phosphatase activity 0.51% (1/198) 7.24 0.006586 0.040568
GO:0009620 response to fungus 0.51% (1/198) 7.24 0.006586 0.040568
GO:0042742 defense response to bacterium 0.51% (1/198) 7.24 0.006586 0.040568
GO:0004865 protein serine/threonine phosphatase inhibitor activity 0.51% (1/198) 7.24 0.006586 0.040568
GO:0043086 negative regulation of catalytic activity 0.51% (1/198) 7.24 0.006586 0.040568
GO:0051346 negative regulation of hydrolase activity 0.51% (1/198) 7.24 0.006586 0.040568
GO:0035308 negative regulation of protein dephosphorylation 0.51% (1/198) 7.24 0.006586 0.040568
GO:0035305 negative regulation of dephosphorylation 0.51% (1/198) 7.24 0.006586 0.040568
GO:0051248 negative regulation of protein metabolic process 0.51% (1/198) 7.24 0.006586 0.040568
GO:0050832 defense response to fungus 0.51% (1/198) 7.24 0.006586 0.040568
GO:0097159 organic cyclic compound binding 11.62% (23/198) 0.84 0.004864 0.044066
GO:1901363 heterocyclic compound binding 11.62% (23/198) 0.84 0.004864 0.044066
GO:0016836 hydro-lyase activity 1.01% (2/198) 3.96 0.007402 0.044703
GO:0004425 indole-3-glycerol-phosphate synthase activity 0.51% (1/198) 6.66 0.009862 0.048994
GO:0051707 response to other organism 0.51% (1/198) 6.66 0.009862 0.048994
GO:0098542 defense response to other organism 0.51% (1/198) 6.66 0.009862 0.048994
GO:0009607 response to biotic stimulus 0.51% (1/198) 6.66 0.009862 0.048994
GO:0043207 response to external biotic stimulus 0.51% (1/198) 6.66 0.009862 0.048994
GO:0000813 ESCRT I complex 0.51% (1/198) 6.66 0.009862 0.048994
GO:0032509 endosome transport via multivesicular body sorting pathway 0.51% (1/198) 6.66 0.009862 0.048994
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_104 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_289 0.025 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_277 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_296 0.034 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_13 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_78 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_72 0.024 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_72 0.024 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_112 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_134 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_319 0.027 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_98 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_77 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_80 0.026 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_180 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_158 0.025 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_115 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_153 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_149 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_162 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_69 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_45 0.016 OrthoFinder output from all 47 species Compare
Sequences (198) (download table)

InterPro Domains

GO Terms

Family Terms