Coexpression cluster: Cluster_58 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043226 organelle 10.75% (10/93) 3.14 0.0 2.9e-05
GO:0043229 intracellular organelle 10.75% (10/93) 3.14 0.0 5.6e-05
GO:0005575 cellular_component 17.2% (16/93) 2.02 2e-06 0.000151
GO:0110165 cellular anatomical entity 15.05% (14/93) 2.11 4e-06 0.000276
GO:0043603 amide metabolic process 7.53% (7/93) 3.09 2e-05 0.000303
GO:0044271 cellular nitrogen compound biosynthetic process 8.6% (8/93) 2.82 1.9e-05 0.000303
GO:0043604 amide biosynthetic process 7.53% (7/93) 3.2 1.2e-05 0.000304
GO:0043232 intracellular non-membrane-bounded organelle 7.53% (7/93) 3.16 1.5e-05 0.000307
GO:0043228 non-membrane-bounded organelle 7.53% (7/93) 3.16 1.5e-05 0.000307
GO:0034645 cellular macromolecule biosynthetic process 7.53% (7/93) 3.07 2.2e-05 0.000311
GO:0034641 cellular nitrogen compound metabolic process 10.75% (10/93) 2.42 1.9e-05 0.000319
GO:0006518 peptide metabolic process 7.53% (7/93) 3.12 1.8e-05 0.000322
GO:0043043 peptide biosynthetic process 7.53% (7/93) 3.21 1.2e-05 0.000325
GO:0005198 structural molecule activity 7.53% (7/93) 3.13 1.7e-05 0.000326
GO:0003735 structural constituent of ribosome 7.53% (7/93) 3.22 1.1e-05 0.000351
GO:0006412 translation 7.53% (7/93) 3.23 1.1e-05 0.000391
GO:0005840 ribosome 7.53% (7/93) 3.26 9e-06 0.000393
GO:0009059 macromolecule biosynthetic process 8.6% (8/93) 2.97 9e-06 0.000451
GO:0044260 cellular macromolecule metabolic process 8.6% (8/93) 2.69 3.6e-05 0.000487
GO:0001671 ATPase activator activity 2.15% (2/93) 7.33 6.6e-05 0.000839
GO:1901566 organonitrogen compound biosynthetic process 7.53% (7/93) 2.74 9.1e-05 0.001104
GO:0044249 cellular biosynthetic process 8.6% (8/93) 2.37 0.00017 0.00196
GO:0009987 cellular process 18.28% (17/93) 1.4 0.000205 0.002261
GO:1901576 organic substance biosynthetic process 8.6% (8/93) 2.26 0.000278 0.002938
GO:0008150 biological_process 22.58% (21/93) 1.14 0.000395 0.004011
GO:0051087 chaperone binding 2.15% (2/93) 5.94 0.000489 0.004601
GO:0009058 biosynthetic process 8.6% (8/93) 2.15 0.000472 0.004613
GO:0006807 nitrogen compound metabolic process 12.9% (12/93) 1.48 0.001226 0.011122
GO:0044237 cellular metabolic process 12.9% (12/93) 1.46 0.001351 0.011832
GO:0043170 macromolecule metabolic process 11.83% (11/93) 1.52 0.001588 0.013445
GO:0140677 molecular function activator activity 2.15% (2/93) 4.87 0.002153 0.01764
GO:0006952 defense response 2.15% (2/93) 4.84 0.002251 0.017865
GO:0019538 protein metabolic process 9.68% (9/93) 1.61 0.002746 0.021136
GO:1901564 organonitrogen compound metabolic process 10.75% (10/93) 1.5 0.002886 0.021558
GO:0006950 response to stress 3.23% (3/93) 3.35 0.003285 0.023843
GO:0044238 primary metabolic process 12.9% (12/93) 1.21 0.005625 0.036637
GO:0050896 response to stimulus 3.23% (3/93) 3.07 0.00559 0.037366
GO:0043227 membrane-bounded organelle 3.23% (3/93) 3.08 0.005523 0.037918
GO:0043231 intracellular membrane-bounded organelle 3.23% (3/93) 3.09 0.005457 0.038503
GO:0035145 exon-exon junction complex 1.08% (1/93) 7.01 0.007722 0.049037
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_98 0.029 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_217 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_305 0.033 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_22 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_144 0.031 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_158 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_98 0.018 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_104 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_16 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_114 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_234 0.067 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_291 0.021 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_7 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_49 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.023 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_38 0.036 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_34 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_72 0.037 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_89 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_100 0.029 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_104 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_159 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_103 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_155 0.038 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_165 0.02 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_94 0.067 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_176 0.022 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_77 0.019 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_114 0.017 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_141 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_34 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_22 0.021 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_173 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_195 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_303 0.071 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_19 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_97 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_269 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_29 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_129 0.029 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_44 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_196 0.028 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_42 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_45 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_92 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_129 0.029 OrthoFinder output from all 47 species Compare
Sequences (93) (download table)

InterPro Domains

GO Terms

Family Terms