Coexpression cluster: Cluster_98 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009089 lysine biosynthetic process via diaminopimelate 4.55% (2/44) 9.56 3e-06 4.3e-05
GO:0006553 lysine metabolic process 4.55% (2/44) 9.56 3e-06 4.3e-05
GO:0009085 lysine biosynthetic process 4.55% (2/44) 9.56 3e-06 4.3e-05
GO:0046451 diaminopimelate metabolic process 4.55% (2/44) 9.56 3e-06 4.3e-05
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 4.55% (2/44) 10.56 0.0 4.3e-05
GO:0003690 double-stranded DNA binding 9.09% (4/44) 5.53 2e-06 9.3e-05
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 4.55% (2/44) 8.76 9e-06 0.00013
GO:0043648 dicarboxylic acid metabolic process 4.55% (2/44) 8.39 1.5e-05 0.000195
GO:0080090 regulation of primary metabolic process 11.36% (5/44) 3.17 0.000227 0.001055
GO:0051171 regulation of nitrogen compound metabolic process 11.36% (5/44) 3.17 0.000227 0.001055
GO:0031323 regulation of cellular metabolic process 11.36% (5/44) 3.17 0.000227 0.001055
GO:0019222 regulation of metabolic process 11.36% (5/44) 3.14 0.000255 0.001083
GO:0060255 regulation of macromolecule metabolic process 11.36% (5/44) 3.14 0.000253 0.001124
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.36% (5/44) 3.21 0.000201 0.001141
GO:0031326 regulation of cellular biosynthetic process 11.36% (5/44) 3.22 0.000198 0.001187
GO:0009889 regulation of biosynthetic process 11.36% (5/44) 3.22 0.000198 0.001187
GO:0010556 regulation of macromolecule biosynthetic process 11.36% (5/44) 3.22 0.000198 0.001187
GO:0010468 regulation of gene expression 11.36% (5/44) 3.18 0.000221 0.001188
GO:0009066 aspartate family amino acid metabolic process 4.55% (2/44) 6.98 0.000117 0.001189
GO:0009067 aspartate family amino acid biosynthetic process 4.55% (2/44) 7.04 0.000107 0.001211
GO:1903506 regulation of nucleic acid-templated transcription 11.36% (5/44) 3.22 0.000195 0.001417
GO:2001141 regulation of RNA biosynthetic process 11.36% (5/44) 3.22 0.000195 0.001417
GO:0006355 regulation of DNA-templated transcription 11.36% (5/44) 3.22 0.000195 0.001417
GO:0051252 regulation of RNA metabolic process 11.36% (5/44) 3.22 0.000195 0.001417
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 4.55% (2/44) 6.14 0.000378 0.001543
GO:1901607 alpha-amino acid biosynthetic process 4.55% (2/44) 5.52 0.00089 0.003491
GO:0008652 amino acid biosynthetic process 4.55% (2/44) 5.21 0.001369 0.004985
GO:0003855 3-dehydroquinate dehydratase activity 2.27% (1/44) 9.56 0.00132 0.004988
GO:0003676 nucleic acid binding 13.64% (6/44) 2.26 0.001481 0.005209
GO:0050794 regulation of cellular process 11.36% (5/44) 2.52 0.001733 0.005892
GO:1901605 alpha-amino acid metabolic process 4.55% (2/44) 4.98 0.001868 0.006147
GO:0050789 regulation of biological process 11.36% (5/44) 2.47 0.002037 0.006494
GO:0065007 biological regulation 11.36% (5/44) 2.45 0.002136 0.006602
GO:0003677 DNA binding 9.09% (4/44) 2.67 0.003532 0.010596
GO:0046394 carboxylic acid biosynthetic process 4.55% (2/44) 4.35 0.004418 0.012875
GO:0009536 plastid 2.27% (1/44) 7.39 0.005928 0.016341
GO:0009507 chloroplast 2.27% (1/44) 7.39 0.005928 0.016341
GO:0016053 organic acid biosynthetic process 4.55% (2/44) 4.11 0.006101 0.016378
GO:0044283 small molecule biosynthetic process 4.55% (2/44) 3.78 0.009453 0.024722
GO:0006520 amino acid metabolic process 4.55% (2/44) 3.73 0.010033 0.025584
GO:0043227 membrane-bounded organelle 4.55% (2/44) 3.59 0.012048 0.02926
GO:0043231 intracellular membrane-bounded organelle 4.55% (2/44) 3.59 0.012048 0.02926
GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor 2.27% (1/44) 6.04 0.015081 0.034959
GO:0003885 D-arabinono-1,4-lactone oxidase activity 2.27% (1/44) 6.04 0.015081 0.034959
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_45 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_163 0.021 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_168 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_187 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_36 0.022 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_42 0.024 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_45 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_76 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_117 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_89 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_230 0.027 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_116 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_199 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_139 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_161 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_34 0.022 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_48 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_60 0.028 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_90 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_99 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_113 0.027 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_117 0.04 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_72 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_111 0.033 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_142 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_149 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_155 0.028 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_27 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_149 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_177 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_210 0.027 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_169 0.015 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_71 0.023 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_11 0.021 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_44 0.035 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_87 0.029 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_96 0.023 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_128 0.018 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_160 0.016 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_165 0.026 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_172 0.025 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_155 0.023 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_64 0.022 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_150 0.027 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_33 0.034 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_47 0.024 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_111 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.024 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_60 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_61 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_46 0.023 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_69 0.022 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_77 0.034 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_100 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_188 0.03 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_193 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_303 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_90 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_105 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_129 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_140 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_141 0.027 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_165 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_202 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_204 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_41 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_84 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_94 0.033 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_95 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_136 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_42 0.022 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_59 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_8 0.018 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_47 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_129 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_155 0.026 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_32 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_21 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_158 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_12 0.015 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_105 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_111 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_21 0.021 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_59 0.021 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_120 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_137 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_150 0.027 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_154 0.027 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_10 0.026 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_25 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_34 0.024 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_38 0.026 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_65 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_67 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_113 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_119 0.031 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_120 0.025 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_121 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_127 0.025 OrthoFinder output from all 47 species Compare
Sequences (44) (download table)

InterPro Domains

GO Terms

Family Terms