Coexpression cluster: Cluster_45 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034062 5'-3' RNA polymerase activity 11.76% (6/51) 5.85 0.0 0.0
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 11.76% (6/51) 5.85 0.0 0.0
GO:0097747 RNA polymerase activity 11.76% (6/51) 5.85 0.0 0.0
GO:0006351 DNA-templated transcription 11.76% (6/51) 5.65 0.0 0.0
GO:0097659 nucleic acid-templated transcription 11.76% (6/51) 5.65 0.0 0.0
GO:0016779 nucleotidyltransferase activity 11.76% (6/51) 5.6 0.0 0.0
GO:0032774 RNA biosynthetic process 11.76% (6/51) 5.52 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 11.76% (6/51) 5.24 0.0 0.0
GO:0016772 transferase activity, transferring phosphorus-containing groups 15.69% (8/51) 4.16 0.0 0.0
GO:0034654 nucleobase-containing compound biosynthetic process 11.76% (6/51) 5.25 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 11.76% (6/51) 5.13 0.0 0.0
GO:0018130 heterocycle biosynthetic process 11.76% (6/51) 5.1 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 11.76% (6/51) 5.05 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 11.76% (6/51) 4.94 0.0 0.0
GO:0016070 RNA metabolic process 11.76% (6/51) 4.77 0.0 1e-06
GO:0043170 macromolecule metabolic process 19.61% (10/51) 3.11 0.0 1e-06
GO:0016740 transferase activity 15.69% (8/51) 3.63 0.0 1e-06
GO:0090304 nucleic acid metabolic process 11.76% (6/51) 4.39 0.0 2e-06
GO:0006807 nitrogen compound metabolic process 19.61% (10/51) 2.96 1e-06 3e-06
GO:0008152 metabolic process 21.57% (11/51) 2.73 1e-06 3e-06
GO:0003677 DNA binding 11.76% (6/51) 4.31 1e-06 3e-06
GO:0044237 cellular metabolic process 19.61% (10/51) 2.87 1e-06 4e-06
GO:0009059 macromolecule biosynthetic process 13.73% (7/51) 3.72 1e-06 4e-06
GO:0044238 primary metabolic process 19.61% (10/51) 2.8 1e-06 6e-06
GO:0044271 cellular nitrogen compound biosynthetic process 13.73% (7/51) 3.64 1e-06 6e-06
GO:0006139 nucleobase-containing compound metabolic process 11.76% (6/51) 4.07 2e-06 6e-06
GO:0071704 organic substance metabolic process 19.61% (10/51) 2.75 2e-06 7e-06
GO:0006725 cellular aromatic compound metabolic process 11.76% (6/51) 3.99 2e-06 7e-06
GO:0046483 heterocycle metabolic process 11.76% (6/51) 4.0 2e-06 7e-06
GO:1901360 organic cyclic compound metabolic process 11.76% (6/51) 3.97 2e-06 7e-06
GO:0044249 cellular biosynthetic process 13.73% (7/51) 3.42 4e-06 1.2e-05
GO:1901576 organic substance biosynthetic process 13.73% (7/51) 3.39 4e-06 1.4e-05
GO:0009058 biosynthetic process 13.73% (7/51) 3.34 6e-06 1.7e-05
GO:0009987 cellular process 19.61% (10/51) 2.48 9e-06 2.7e-05
GO:0003824 catalytic activity 19.61% (10/51) 2.47 1e-05 2.8e-05
GO:0034641 cellular nitrogen compound metabolic process 13.73% (7/51) 3.2 1e-05 2.9e-05
GO:0008150 biological_process 21.57% (11/51) 2.26 1.3e-05 3.5e-05
GO:0003676 nucleic acid binding 11.76% (6/51) 3.24 4e-05 0.000105
GO:1901363 heterocyclic compound binding 13.73% (7/51) 2.34 0.000425 0.001052
GO:0097159 organic cyclic compound binding 13.73% (7/51) 2.34 0.000425 0.001052
GO:0003674 molecular_function 21.57% (11/51) 1.6 0.000769 0.001857
GO:0005488 binding 13.73% (7/51) 1.79 0.003837 0.009044
GO:0009579 thylakoid 1.96% (1/51) 7.73 0.004707 0.010836
GO:0019538 protein metabolic process 7.84% (4/51) 2.24 0.010089 0.0227
GO:0140096 catalytic activity, acting on a protein 5.88% (3/51) 2.67 0.011634 0.025595
GO:1901564 organonitrogen compound metabolic process 7.84% (4/51) 1.98 0.018483 0.039779
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_57 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_123 0.015 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_192 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_353 0.015 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_87 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_7 0.023 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_64 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_13 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_83 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_128 0.016 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_3 0.029 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_7 0.023 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_13 0.027 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_27 0.03 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_32 0.02 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_40 0.04 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_49 0.022 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_53 0.022 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_67 0.028 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_71 0.02 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_91 0.023 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_96 0.022 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_98 0.022 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_99 0.021 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_102 0.019 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_148 0.039 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_5 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_90 0.02 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_81 0.024 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_41 0.016 OrthoFinder output from all 47 species Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms