Mp1g26960.1

Description : component RPL39 of LSU proteome component

Gene families : OG0008672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008672_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g26960.1
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00023530	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT2G25210	No alias	Ribosomal protein L39 family protein	0.1	OrthoFinder output from all 47 species
AT3G02190	No alias	Ribosomal protein L39 family protein	0.06	OrthoFinder output from all 47 species
AT4G31985	No alias	Ribosomal protein L39 family protein	0.06	OrthoFinder output from all 47 species
Azfi_s0238.g059648	No alias	component *(eL39) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.08G063600.1	Ceric.08G063600	component *(eL39) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.10G064100.1	Ceric.10G064100	component *(eL39) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.13G096600.1	Ceric.13G096600	component *(eL39) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.19G017600.1	Ceric.19G017600	component *(eL39) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g17362	No alias	component *(eL39) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
GSVIVT01035913001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
LOC_Os02g55370.1	LOC_Os02g55370	component RPL39 of LSU proteome component	0.05	OrthoFinder output from all 47 species
LOC_Os06g08320.1	LOC_Os06g08320	component RPL39 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_92282g0010	No alias	component RPL39 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Pp3c15_14860V3.1	Pp3c15_14860	Ribosomal protein L39 family protein	0.09	OrthoFinder output from all 47 species
Pp3c6_610V3.1	Pp3c6_610	Ribosomal protein L39 family protein	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012412	No alias	component *(eL39) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Solyc07g005050.3.1	Solyc07g005050	component RPL39 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Solyc12g010350.3.1	Solyc12g010350	component RPL39 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e023685_P001	Zm00001e023685	component RPL39 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000077	Ribosomal_L39	9	49

External Links

No external refs found!

Mp1g26960.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation