1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp5g09510.1

Mp5g09510.1


Description : component RPS27 of SSU proteome


Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g09510.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.04 OrthoFinder output from all 47 species
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.16 OrthoFinder output from all 47 species
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.14 OrthoFinder output from all 47 species
Als_g39722 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aob_g24902 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36661.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55503.t1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008655 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Azfi_s0182.g056413 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g35394 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.05G019300.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.26G067400.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Ceric.34G024800.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 OrthoFinder output from all 47 species
Dac_g00043 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Dac_g17983 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Dac_g40966 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g20815 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g35625 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.16 OrthoFinder output from all 47 species
Dcu_g35656 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Dde_g00057 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.24 OrthoFinder output from all 47 species
GSVIVT01032964001 ARS27A, RS27A Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder output from all 47 species
LOC_Os04g27860.1 LOC_Os04g27860 component RPS27 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os04g32710.1 LOC_Os04g32710 component RPS27 of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g40961 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_54625g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.09 OrthoFinder output from all 47 species
Pir_g50426 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_15840V3.1 Pp3c1_15840 ribosomal protein S27 0.21 OrthoFinder output from all 47 species
Pp3c22_18310V3.1 ARS27A, RS27A,... ribosomal protein S27 0.1 OrthoFinder output from all 47 species
Pp3c2_20540V3.1 ARS27A, RS27A,... ribosomal protein S27 0.12 OrthoFinder output from all 47 species
Sam_g37791 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo163947 ARS27A, RS27A Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder output from all 47 species
Solyc01g008080.3.1 ARS27A, RS27A,... component RPS27 of SSU proteome 0.04 OrthoFinder output from all 47 species
Solyc01g008090.4.1 ARS27A, RS27A,... component RPS27 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g16488 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g24199 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e024704_P001 ARS27A, RS27A,... component RPS27 of SSU proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 30 84
No external refs found!