Description : pre-60S ribosomal subunit export factor (Bud20)
Gene families : OG0003346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003346_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp5g16300.1 | |
| Cluster | HCCA: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00161p00051000 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Als_g43314 | No alias | pre-60S ribosomal-subunit proteome export factor... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g015896 | No alias | pre-60S ribosomal-subunit proteome export factor... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001530.2 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g734628 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03352 | No alias | pre-60S ribosomal-subunit proteome export factor... | 0.18 | OrthoFinder output from all 47 species | |
| GSVIVT01033644001 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g45040.1 | LOC_Os08g45040 | pre-60S ribosomal subunit export factor (Bud20) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g30030 | No alias | pre-60S ribosomal-subunit proteome export factor... | 0.02 | OrthoFinder output from all 47 species | |
| Smo149266 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022755 | Znf_C2H2_jaz | 56 | 82 |
| No external refs found! |
