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  5. MA_18547g0010

MA_18547g0010 (AGO1)


Aliases : AGO1

Description : Protein argonaute 1A OS=Oryza sativa subsp. japonica (sp|q6eu14|ago1a_orysj : 342.0)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: MA_18547g0010
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT1G48410 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 OrthoFinder output from all 47 species
AT1G69440 AGO7, ZIP Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT2G27040 AGO4, OCP11 Argonaute family protein 0.03 OrthoFinder output from all 47 species
Aob_g22649 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19810.t1 AGO7, ZIP,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29180.t1 AGO1, Aspi01Gene29180 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71412.t1 AGO9, Aspi01Gene71412 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026268001 AGO2 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01031430001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Gb_13708 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
MA_9991250g0010 PNH, AGO10, ZLL Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g13472 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Pir_g66376 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Pp3c17_350V3.1 AGO1, Pp3c17_350 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 OrthoFinder output from all 47 species
Spa_g54963 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003165 Piwi 80 215
No external refs found!