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  5. Solyc07g008650.4.1

Solyc07g008650.4.1 (emb2191, Solyc07g008650)


Aliases : emb2191, Solyc07g008650

Description : component TAD2 of TAD2-TAD3 tRNA adenosine deaminase complex


Gene families : OG0001810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g008650.4.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Ala_g10308 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16061 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06605.t1 TADA, ATTADA,... chloroplast-tRNA adenosine deaminase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0103.g044667 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Cba_g01679 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Cba_g10553 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G061600.1 TADA, ATTADA,... chloroplast-tRNA adenosine deaminase & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021742.2 TADA, ATTADA RNA processing.organelle machineries.RNA... 0.01 OrthoFinder output from all 47 species
Dde_g47919 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Lfl_g04503 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Msp_g43293 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Nbi_g28987 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Ppi_g33024 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56216 emb2191 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Sam_g30379 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Spa_g21666 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13038 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23497 emb2191 EC_3.5 hydrolase acTing on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002125 CMP_dCMP_dom 37 141
No external refs found!