Sam_g17168

Description : RNA splicing factor *(RSZ21/22) & original description: none

Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17168
Cluster	HCCA: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g408200	At-RSZ22a, RSZ22a	RNA processing.RNA splicing.spliceosome-associated...	0.03	OrthoFinder output from all 47 species
GSVIVT01020220001	At-RSZ22a, RSZ22a	RNA processing.RNA splicing.spliceosome-associated...	0.04	OrthoFinder output from all 47 species
Zm00001e036288_P001	At-RSZ22a,...	RSZ21/22 RNA splicing factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	122	137
IPR000504	RRM_dom	13	77

External Links

No external refs found!